BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030D12LP1|AL429224
(945 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1247 1832 0.0
3x_Contig195 1553 0.0
>3x_Contig1247
Length = 7218
Score = 1832 bits (919), Expect = 0.0
Identities = 935/945 (98%)
Strand = Plus / Minus
Query: 1 gatctcaatgatgatcttagttagcttcgtcagcttcgtcagcttcgtcatcttcgtmat 60
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4342 gatctcaatgatcatcttcgttagcttcgtcagcttcgtcagcttcgtcatcttcgtcat 4283
Query: 61 atcttggtctctttcattgcgaaaaagatcgcgcttaggtttctagtttggcaagcaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4282 atcttggtctctttcattgcgaaaaagatcgcgcttaggtttctagtttggcaagcaact 4223
Query: 121 ttttatgcatttcactcagcttagcaaaatcagtttcctgtgcaggcsaacctacgatta 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4222 ttttatgcatttcactcagcttagcaaaatcagtttcctgtgcaggccaacctacgatta 4163
Query: 181 atccagcatcmtttgttttctttgggatcaaatggaaatgcacgtgatcwacttcttgat 240
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4162 atccagcatcctttgttttctttgggatcaaatggaaatgcacgtgatctacttcttgat 4103
Query: 241 gggctattctaccgttgttttgaaggacattgtaccctggaccatcaggaccatcttggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4102 gggctattctaccgttgttttgaaggacattgtaccctggaccatcaggaccatcttggt 4043
Query: 301 cgaagccaatggctttcactaacttcttagtaactggsaamaggtcagctaagtattcat 360
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 4042 cgaagccaatggctttcactaacttcttagtaactggcaacaggtcagctaagtattcat 3983
Query: 361 ctgggatgttgtgcaatttcccaccgtggtgctttggaatgataagaatgtggttctctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3982 ctgggatgttgtgcaatttcccaccgtggtgctttggaatgataagaatgtggttctctt 3923
Query: 421 cagttggttggatgtkaaggaacgagtaagaatactgagtttcaaccaatttgaaagaag 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3922 cagttggttggatgtcaaggaacgagtaagaatactgagtttcaaccaatttgaaagaag 3863
Query: 481 ggatttcacctgaaagtacaccagtagtggaatctgttagtattatagttcataagatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3862 ggatttcacctgaaagtacaccagtagtggaatctgttagtattatagttcataagatca 3803
Query: 541 aagagctagtctaagccacttgggtggttgcgagcatgcaaaaaccaaggggagaaacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3802 aagagctagtctaagccacttgggtggttgcgagcatgcaaaaaccaaggggagaaacag 3743
Query: 601 atatttgttctcacctaacaatttgaggtttacatacctttgataatcttgcagaaaata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3742 atatttgttctcacctaacaatttgaggtttacatacctttgataatcttgcagaaaata 3683
Query: 661 caagcagcgtcgtgggcaacagcactcattggtatcggcttattaaacgtttgaattcac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3682 caagcagcgtcgtgggcaacagcactcattggtatcggcttattaaacgtttgaattcac 3623
Query: 721 acgtatcggtacttattgcaatatttctttcgactgcgaaaatgttggagaatctgcaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3622 acgtatcggtacttattgcaatatttctttcgactgcgaaaatgttggagaatctgcaac 3563
Query: 781 taattggagttcagtcttttttcatcattatacatttgtgtattggcccttatatatatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3562 taattggagttcagtcttttttcatcattatacatttgtgtattggcccttatatatatg 3503
Query: 841 ttcttatgatataaaaaaaaaccaagttctagaaaactagaatagttggtgacacgacat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3502 ttcttatgatataaaaaaaaaccaagttctagaaaactagaatagttggtgacacgacat 3443
Query: 901 gagaatcatgattcggagtggttctcgtactaatgtagggsacga 945
|||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3442 gagaatcatgattcggagtggttctcgtactaatgtagggcacga 3398
>3x_Contig195
Length = 923
Score = 1553 bits (779), Expect = 0.0
Identities = 791/799 (98%)
Strand = Plus / Plus
Query: 14 atcttagttagcttcgtcagcttcgtcagcttcgtcatcttcgtmatatcttggtctctt 73
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5 atcttcgttagcttcgtcagcttcgtcagcttcgtcatcttcgtcatatcttggtctctt 64
Query: 74 tcattgcgaaaaagatcgcgcttaggtttctagtttggcaagcaactttttatgcatttc 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tcattgcgaaaaagatcgcgcttaggtttctagtttggcaagcaactttttatgcatttc 124
Query: 134 actcagcttagcaaaatcagtttcctgtgcaggcsaacctacgattaatccagcatcmtt 193
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 125 actcagcttagcaaaatcagtttcctgtgcaggccaacctacgattaatccagcatcctt 184
Query: 194 tgttttctttgggatcaaatggaaatgcacgtgatcwacttcttgatgggctattctacc 253
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 185 tgttttctttgggatcaaatggaaatgcacgtgatctacttcttgatgggctattctacc 244
Query: 254 gttgttttgaaggacattgtaccctggaccatcaggaccatcttggtcgaagccaatggc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gttgttttgaaggacattgtaccctggaccatcaggaccatcttggtcgaagccaatggc 304
Query: 314 tttcactaacttcttagtaactggsaamaggtcagctaagtattcatctgggatgttgtg 373
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 305 tttcactaacttcttagtaactggcaacaggtcagctaagtattcatctgggatgttgtg 364
Query: 374 caatttcccaccgtggtgctttggaatgataagaatgtggttctcttcagttggttggat 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 caatttcccaccgtggtgctttggaatgataagaatgtggttctcttcagttggttggat 424
Query: 434 gtkaaggaacgagtaagaatactgagtttcaaccaatttgaaagaagggatttcacctga 493
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gtcaaggaacgagtaagaatactgagtttcaaccaatttgaaagaagggatttcacctga 484
Query: 494 aagtacaccagtagtggaatctgttagtattatagttcataagatcaaagagctagtcta 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aagtacaccagtagtggaatctgttagtattatagttcataagatcaaagagctagtcta 544
Query: 554 agccacttgggtggttgcgagcatgcaaaaaccaaggggagaaacagatatttgttctca 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 agccacttgggtggttgcgagcatgcaaaaaccaaggggagaaacagatatttgttctca 604
Query: 614 cctaacaatttgaggtttacatacctttgataatcttgcagaaaatacaagcagcgtcgt 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cctaacaatttgaggtttacatacctttgataatcttgcagaaaatacaagcagcgtcgt 664
Query: 674 gggcaacagcactcattggtatcggcttattaaacgtttgaattcacacgtatcggtact 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gggcaacagcactcattggtatcggcttattaaacgtttgaattcacacgtatcggtact 724
Query: 734 tattgcaatatttctttcgactgcgaaaatgttggagaatctgcaactaattggagttca 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tattgcaatatttctttcgactgcgaaaatgttggagaatctgcaactaattggagttca 784
Query: 794 gtcttttttcatcattata 812
|||||||||||||||||||
Sbjct: 785 gtcttttttcatcattata 803
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7229
Number of Sequences: 1807
Number of extensions: 7229
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 2
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)